PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054809.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GATA
Protein Properties Length: 149aa    MW: 16783.7 Da    PI: 9.4125
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054809.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA37.24e-12127935
          GATA  9 TplWRrgpdgnktLCnaCGlyyrkkgl 35
                  TplWR+gp  ++ LCnaCG ++r kg+
  EcC054809.10  1 TPLWRNGPPEKPVLCNACGSRWRTKGT 27
                  9*******88888***********997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF003207.4E-10127IPR000679Zinc finger, GATA-type
SuperFamilySSF577162.42E-6131No hitNo description
SMARTSM004010.0073141IPR000679Zinc finger, GATA-type
CDDcd002021.42E-11141No hitNo description
Gene3DG3DSA:3.30.50.109.7E-9127IPR013088Zinc finger, NHR/GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005509Molecular Functioncalcium ion binding
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
TPLWRNGPPE KPVLCNACGS RWRTKGTLAN YTPLHARAEP GDYEDHRFGR GKNISINLNK  60
NKEVKVPKRK QYPDDMVFGG IMSDYNQGFQ KFIDDDTSNR SSSGSAISNS DAQFGSADAS  120
DLTGWTSISY LWKYVFLVLQ NKRTCSSFF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010053539.12e-78PREDICTED: GATA transcription factor 26-like isoform X1
SwissprotQ8W4H12e-36GAT26_ARATH; GATA transcription factor 26
TrEMBLA0A059CHC92e-78A0A059CHC9_EUCGR; Uncharacterized protein
STRINGPOPTR_0003s08080.14e-56(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.24e-37GATA transcription factor 26